Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AL592437.2-201ENST00000421655 2434 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 Y_RNA.326-201ENST00000365176 113 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 Y_RNA.576-201ENST00000384781 102 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 MIR195-201ENST00000385194 87 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AL359634.1-202ENST00000404721 284 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 RNA5SP296-201ENST00000410523 111 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 RPS7P15-201ENST00000415804 584 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC114491.1-201ENST00000416095 246 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 RN7SL812P-201ENST00000493791 279 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC008958.1-201ENST00000511047 682 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC026402.1-201ENST00000513642 170 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AP003072.1-201ENST00000531740 145 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC068446.3-201ENST00000555285 382 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 TVP23BP1-201ENST00000557500 617 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC022432.1-201ENST00000595739 310 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AL034351.1-201ENST00000605288 668 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC092807.2-201ENST00000609367 243 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 uc_338.15-201ENST00000615470 191 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AL357559.1-201ENST00000622228 274 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 AC121333.1-201ENST00000567488 2709 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 TPTE2P4-201ENST00000258589 1605 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SH3RF2Q8TEC5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.69
SH3RF2Q8TEC5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MAPK10-304ENST00000641341 3984 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RNU6-356P-201ENST00000384140 107 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 SNORA57.1-201ENST00000391227 145 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 SOD2P1-201ENST00000396543 562 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MTCO2P27-201ENST00000420740 428 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RPL7P46-201ENST00000425129 740 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RPL23AP25-201ENST00000430973 463 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 KCTD9P3-201ENST00000434597 1169 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC024082.2-201ENST00000434771 238 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MTCYBP6-201ENST00000441810 138 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 snoU13.3-201ENST00000459441 104 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 TRBV1-201ENST00000476502 284 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RN7SL691P-201ENST00000494487 301 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC108078.2-201ENST00000510750 236 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RN7SKP46-201ENST00000515942 234 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RNU6-1095P-201ENST00000516148 108 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RNU6-864P-201ENST00000516256 108 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 MIR2116-201ENST00000517221 80 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RANP3-201ENST00000530970 276 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 HMGB2P1-201ENST00000591146 634 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 BNIP3P22-201ENST00000593399 556 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC008638.3-201ENST00000603341 463 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 IGHV3-29-201ENST00000604817 344 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AL591034.3-201ENST00000605511 685 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 AC090229.1-201ENST00000590983 1609 ntBASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF2Q8TEC5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF2Q8TEC5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF2Q8TEC5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.51□□□□□ -1.69
SH3RF2Q8TEC5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.51□□□□□ -1.69
SH3RF2Q8TEC5 RNU6-263P-201ENST00000363811 107 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms