Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RN7SKP272-201ENST00000516988 232 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 RNA5SP291-201ENST00000517222 105 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 SUB1P1-201ENST00000524415 382 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AL355836.1-201ENST00000555951 870 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AC093838.1-201ENST00000613014 469 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AL392048.1-201ENST00000613946 534 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AC244100.1-202ENST00000621554 382 ntBASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.34□□□□□ -2.03
RCL1Q9Y2P8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
RCL1Q9Y2P8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RNA5SP72-201ENST00000364442 117 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RNU6-1078P-201ENST00000364522 103 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 SNORA54-201ENST00000384281 123 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AL356057.2-201ENST00000403318 432 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC098614.2-201ENST00000426040 255 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC092427.1-202ENST00000430569 476 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 OR4K11P-201ENST00000431829 904 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AL049734.2-201ENST00000441066 616 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 BNIP3P2-201ENST00000441221 577 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 Z75741.1-201ENST00000446793 314 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AP1S2P1-201ENST00000457344 379 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RPS20P20-201ENST00000460498 340 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC097493.1-201ENST00000463958 372 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC003982.1-202ENST00000469928 248 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RPL31P50-201ENST00000471002 296 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RPL7P49-201ENST00000471402 708 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 RN7SL293P-201ENST00000481765 281 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 SCARNA13-201ENST00000516672 275 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC005832.3-201ENST00000537929 631 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 TRAV28-201ENST00000557548 323 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 NCAPGP2-201ENST00000557911 754 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 MIR3944-201ENST00000581277 108 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AC079395.3-201ENST00000615161 484 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AL603758.1-201ENST00000618654 241 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 AL022578.1-201ENST00000439330 1433 ntBASIC2.33□□□□□ -2.04
RCL1Q9Y2P8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AL161781.1-201ENST00000354277 403 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 RNU6-637P-201ENST00000384050 107 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 MIR592-201ENST00000384959 97 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 SNORA40.2-201ENST00000390847 128 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 RNA5SP171-201ENST00000391071 115 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 TIMM9P2-201ENST00000419324 266 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AL451062.2-201ENST00000427515 271 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC009296.1-201ENST00000443146 155 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 DDX3P2-201ENST00000446138 111 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 RPL37P4-201ENST00000448908 268 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC126182.1-201ENST00000478134 357 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 RPL23AP70-201ENST00000483361 460 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LARP1BP2-201ENST00000486594 519 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 RNU6-840P-201ENST00000517275 65 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AL132657.2-201ENST00000564417 358 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC104072.1-201ENST00000568817 668 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 MIR4444-1-201ENST00000581696 74 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 MIR3605-201ENST00000583214 100 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 MIR4444-2-201ENST00000584390 74 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 BBIP1P1-201ENST00000602999 279 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 ELOCP35-201ENST00000604289 336 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC103710.4-201ENST00000609301 899 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC231657.1-201ENST00000624313 397 ntBASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.32□□□□□ -2.04
RCL1Q9Y2P8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms