Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-1338P-201ENST00000516328 91 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AF186190.1-201ENST00000517470 480 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC063949.1-201ENST00000552900 865 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AL118522.2-201ENST00000616045 615 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RNU6-156P-201ENST00000621869 107 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RLIMP1-201ENST00000339626 1680 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SMG1P4-204ENST00000523028 4131 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RNU6-858P-201ENST00000362436 107 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 Y_RNA.76-201ENST00000362931 109 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RN7SKP115-201ENST00000363177 317 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SNORD73A-201ENST00000386062 65 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RPL23AP38-201ENST00000423801 469 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RPL21P103-201ENST00000479921 488 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SCARNA24.2-201ENST00000516968 130 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 Y_RNA.713-201ENST00000517013 96 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AMZ2P1-203ENST00000565833 850 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC007342.5-201ENST00000571340 2142 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AC012119.1-201ENST00000603184 222 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RPSAP73-201ENST00000614820 330 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 MIR6837-201ENST00000620884 64 ntBASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXR1Q6PIV2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AL445437.1-201ENST00000623157 3087 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 HAUS6P2-201ENST00000433254 2404 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 RNU6-47P-201ENST00000383866 107 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC009804.1-201ENST00000400949 179 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 RNU2-51P-201ENST00000410708 197 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AL133173.1-201ENST00000423458 397 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 GAPDHP27-201ENST00000447427 1020 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC239809.1-201ENST00000450470 217 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 COPS8P2-201ENST00000473228 627 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 RN7SL826P-201ENST00000479724 288 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC009120.1-201ENST00000493458 473 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 SERF1AP1-201ENST00000514575 187 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC144568.1-201ENST00000520139 137 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MRPS21P7-201ENST00000566937 238 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AC136932.1-201ENST00000574771 208 ntBASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
FOXR1Q6PIV2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms