Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 MTCO1P35-201ENST00000515270 228 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 RN7SKP60-201ENST00000516985 239 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AC015912.2-201ENST00000571053 181 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AC008521.1-201ENST00000587471 187 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 IPO5P1-202ENST00000600039 287 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AL365204.3-201ENST00000612448 685 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 AL359547.2-201ENST00000615810 418 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC3BQ53EP0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AP001273.1-201ENST00000624493 3152 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR5P1P-201ENST00000299512 925 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 Y_RNA.373-201ENST00000365600 103 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RNU4-20P-201ENST00000365601 151 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RNU6-38P-201ENST00000384085 107 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RNU6-550P-201ENST00000391057 101 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AL592291.1-201ENST00000403830 352 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RPL21P66-201ENST00000426566 466 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RNU6-333P-201ENST00000459117 107 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RNU7-180P-201ENST00000459240 63 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC007547.1-201ENST00000462177 490 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC078817.1-201ENST00000492623 435 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC117522.3-201ENST00000507974 584 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 NARSP2-201ENST00000518524 679 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 BTF3P12-201ENST00000519620 469 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC078814.3-201ENST00000553036 491 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC007424.1-203ENST00000554613 687 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 MED28P6-201ENST00000558776 231 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC091178.1-203ENST00000584586 279 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC067852.3-201ENST00000589177 561 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AL138889.2-201ENST00000603883 242 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AL390240.1-201ENST00000612950 384 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AL355810.1-201ENST00000614629 552 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC112200.1-201ENST00000625015 234 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 DHX9P1-201ENST00000436565 3076 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 OR51H2P-202ENST00000641424 3046 ntBASIC4.54□□□□□ -1.68
FNDC3BQ53EP0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 SALL4P2-201ENST00000423288 2910 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 RN7SKP227-201ENST00000364445 330 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 RNA5SP167-201ENST00000365461 116 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 MT-TD-201ENST00000387419 68 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 LAP3P1-201ENST00000403648 294 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 AL356967.1-201ENST00000406305 431 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 Y_RNA.615-201ENST00000410769 117 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 ARL5AP1-201ENST00000418991 388 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 RPL37P6-201ENST00000460682 294 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 AC078918.1-201ENST00000498515 228 ntBASIC4.53□□□□□ -1.68
FNDC3BQ53EP0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms