Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC090804.1-201ENST00000448870 490 ntBASIC6.88□□□□□ -1.31
CD44P16070 AC146507.2-201ENST00000460608 476 ntBASIC6.88□□□□□ -1.31
CD44P16070 AC022730.1-201ENST00000473114 568 ntBASIC6.88□□□□□ -1.31
CD44P16070 PPIAP19-201ENST00000486414 492 ntBASIC6.88□□□□□ -1.31
CD44P16070 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.88□□□□□ -1.31
CD44P16070 MIR4732-201ENST00000581873 76 ntBASIC6.88□□□□□ -1.31
CD44P16070 MIR6883-201ENST00000614952 78 ntBASIC6.88□□□□□ -1.31
CD44P16070 MIR6503-201ENST00000622884 86 ntBASIC6.88□□□□□ -1.31
CD44P16070 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.88□□□□□ -1.31
CD44P16070 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.88□□□□□ -1.31
CD44P16070 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 AC007390.2-201ENST00000606229 3803 ntBASIC6.88□□□□□ -1.31
CD44P16070 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
CD44P16070 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CD44P16070 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 AC080128.1-201ENST00000474389 1917 ntBASIC6.88□□□□□ -1.31
CD44P16070 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.87□□□□□ -1.31
CD44P16070 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC6.87□□□□□ -1.31
CD44P16070 AC018529.3-201ENST00000624212 2254 ntBASIC6.87□□□□□ -1.31
CD44P16070 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 RNU1-49P-201ENST00000363468 159 ntBASIC6.87□□□□□ -1.31
CD44P16070 RNU1-59P-201ENST00000364829 162 ntBASIC6.87□□□□□ -1.31
CD44P16070 MIR10A-201ENST00000385043 110 ntBASIC6.87□□□□□ -1.31
CD44P16070 RNU6-279P-201ENST00000391297 101 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC013442.1-201ENST00000397347 228 ntBASIC6.87□□□□□ -1.31
CD44P16070 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.87□□□□□ -1.31
CD44P16070 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.87□□□□□ -1.31
CD44P16070 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 AC016027.4-201ENST00000450866 277 ntBASIC6.87□□□□□ -1.31
CD44P16070 AP003385.3-201ENST00000472498 287 ntBASIC6.87□□□□□ -1.31
CD44P16070 RN7SL267P-201ENST00000485107 261 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC114728.1-201ENST00000488289 483 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.87□□□□□ -1.31
CD44P16070 RNU6-840P-201ENST00000517275 65 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC007012.1-201ENST00000567192 175 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC105254.2-201ENST00000603636 436 ntBASIC6.87□□□□□ -1.31
CD44P16070 FAM71BP1-201ENST00000604431 523 ntBASIC6.87□□□□□ -1.31
CD44P16070 U1.25-201ENST00000614085 162 ntBASIC6.87□□□□□ -1.31
CD44P16070 BX005214.3-202ENST00000619809 325 ntBASIC6.87□□□□□ -1.31
CD44P16070 AC068213.1-201ENST00000625124 226 ntBASIC6.87□□□□□ -1.31
CD44P16070 MIR4275-201ENST00000636486 87 ntBASIC6.87□□□□□ -1.31
CD44P16070 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.87□□□□□ -1.31
CD44P16070 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CD44P16070 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CD44P16070 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
CD44P16070 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD44P16070 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.86□□□□□ -1.31
CD44P16070 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 AL033543.1-201ENST00000623440 13454 ntBASIC6.86□□□□□ -1.31
CD44P16070 PWAR1-201ENST00000624188 2414 ntBASIC6.86□□□□□ -1.31
CD44P16070 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 SNORA72.4-201ENST00000384174 132 ntBASIC6.86□□□□□ -1.31
CD44P16070 MIR487A-201ENST00000385009 80 ntBASIC6.86□□□□□ -1.31
CD44P16070 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.86□□□□□ -1.31
CD44P16070 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 RPS3P2-201ENST00000421346 701 ntBASIC6.86□□□□□ -1.31
CD44P16070 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.86□□□□□ -1.31
CD44P16070 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 AL645939.3-201ENST00000435408 225 ntBASIC6.86□□□□□ -1.31
CD44P16070 RPS11P7-201ENST00000442125 465 ntBASIC6.86□□□□□ -1.31
CD44P16070 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.86□□□□□ -1.31
CD44P16070 AC091868.1-201ENST00000508746 304 ntBASIC6.86□□□□□ -1.31
CD44P16070 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 AC010999.1-201ENST00000611856 324 ntBASIC6.86□□□□□ -1.31
CD44P16070 MIR6885-201ENST00000612241 66 ntBASIC6.86□□□□□ -1.31
CD44P16070 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC6.86□□□□□ -1.31
CD44P16070 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.86□□□□□ -1.31
CD44P16070 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CD44P16070 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.86□□□□□ -1.31
CD44P16070 SMG1P5-202ENST00000529428 4219 ntBASIC6.86□□□□□ -1.31
CD44P16070 SMG1P2-201ENST00000566127 4221 ntBASIC6.86□□□□□ -1.31
CD44P16070 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD44P16070 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CD44P16070 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CD44P16070 AC079753.1-201ENST00000623243 3868 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms