Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR2682-201ENST00000580305 110 ntBASIC3.89□□□□□ -1.79
MBD4O95243 UBE2L4-201ENST00000587688 464 ntBASIC3.89□□□□□ -1.79
MBD4O95243 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.89□□□□□ -1.79
MBD4O95243 BCRP9-201ENST00000605312 388 ntBASIC3.89□□□□□ -1.79
MBD4O95243 Z99289.3-201ENST00000605586 594 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AC008962.1-201ENST00000605729 304 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AC103710.4-201ENST00000609301 899 ntBASIC3.89□□□□□ -1.79
MBD4O95243 RNVU1-4-201ENST00000612985 164 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 AL158801.5-201ENST00000623123 465 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AC026422.1-201ENST00000623961 452 ntBASIC3.89□□□□□ -1.79
MBD4O95243 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD4O95243 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD4O95243 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MBD4O95243 AC006378.2-201ENST00000623178 2476 ntBASIC3.89□□□□□ -1.79
MBD4O95243 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
MBD4O95243 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MBD4O95243 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 RNY4P24-201ENST00000362735 96 ntBASIC3.88□□□□□ -1.79
MBD4O95243 RNU6-223P-201ENST00000362830 107 ntBASIC3.88□□□□□ -1.79
MBD4O95243 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
MBD4O95243 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD4O95243 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 RNU6-432P-201ENST00000384196 109 ntBASIC3.88□□□□□ -1.79
MBD4O95243 MIR591-201ENST00000385290 95 ntBASIC3.88□□□□□ -1.79
MBD4O95243 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.88□□□□□ -1.79
MBD4O95243 TMEM167AP1-201ENST00000423409 219 ntBASIC3.88□□□□□ -1.79
MBD4O95243 MTND4P20-201ENST00000424125 869 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
MBD4O95243 RPL23AP83-201ENST00000434984 473 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 RPL17P49-201ENST00000443728 411 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.88□□□□□ -1.79
MBD4O95243 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD4O95243 RNA5SP310-201ENST00000459084 116 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.88□□□□□ -1.79
MBD4O95243 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.88□□□□□ -1.79
MBD4O95243 AC037471.2-201ENST00000564941 598 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 AC011260.1-201ENST00000578420 472 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC012493.2-201ENST00000595083 291 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 AC091965.5-201ENST00000624785 342 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AC019226.1-201ENST00000625666 515 ntBASIC3.88□□□□□ -1.79
MBD4O95243 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
MBD4O95243 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD4O95243 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 RNA5SP374-201ENST00000362939 125 ntBASIC3.87□□□□□ -1.79
MBD4O95243 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.87□□□□□ -1.79
MBD4O95243 RNU6-55P-201ENST00000411092 107 ntBASIC3.87□□□□□ -1.79
MBD4O95243 RNU6-954P-201ENST00000411355 107 ntBASIC3.87□□□□□ -1.79
MBD4O95243 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.87□□□□□ -1.79
MBD4O95243 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.87□□□□□ -1.79
MBD4O95243 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.87□□□□□ -1.79
MBD4O95243 AC011233.1-201ENST00000422812 283 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AC234781.2-201ENST00000426370 994 ntBASIC3.87□□□□□ -1.79
MBD4O95243 NDUFB4P6-201ENST00000436819 366 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AC006028.1-201ENST00000438379 402 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.87□□□□□ -1.79
MBD4O95243 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.87□□□□□ -1.79
MBD4O95243 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.87□□□□□ -1.79
MBD4O95243 MTND1P22-201ENST00000510572 951 ntBASIC3.87□□□□□ -1.79
MBD4O95243 RNU6-798P-201ENST00000516912 103 ntBASIC3.87□□□□□ -1.79
MBD4O95243 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.87□□□□□ -1.79
MBD4O95243 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
MBD4O95243 NIFKP6-201ENST00000598115 845 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AC018638.7-201ENST00000605836 1114 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AC004223.4-201ENST00000612426 332 ntBASIC3.87□□□□□ -1.79
MBD4O95243 AC100793.4-201ENST00000613683 429 ntBASIC3.87□□□□□ -1.79
MBD4O95243 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MBD4O95243 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MBD4O95243 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
MBD4O95243 MTND5P33-201ENST00000571250 1450 ntBASIC3.86□□□□□ -1.79
MBD4O95243 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MBD4O95243 AC012321.1-201ENST00000561622 1588 ntBASIC3.86□□□□□ -1.79
MBD4O95243 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MBD4O95243 RNU6-500P-201ENST00000362349 107 ntBASIC3.86□□□□□ -1.79
MBD4O95243 RNU6-660P-201ENST00000364566 109 ntBASIC3.86□□□□□ -1.79
MBD4O95243 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.86□□□□□ -1.79
MBD4O95243 SNORA36C-201ENST00000384289 132 ntBASIC3.86□□□□□ -1.79
MBD4O95243 SNORA1.3-201ENST00000384676 136 ntBASIC3.86□□□□□ -1.79
MBD4O95243 RPL7L1P10-201ENST00000427790 463 ntBASIC3.86□□□□□ -1.79
MBD4O95243 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.86□□□□□ -1.79
MBD4O95243 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms