Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MTND4LP22-201ENST00000508209 276 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 AC012669.1-201ENST00000603209 283 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 AL732372.2-225ENST00000642124 456 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.84□□□□□ -1.48
USP17L3A6NCW0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.428-201ENST00000384078 102 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.473-201ENST00000384333 102 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AL645608.4-201ENST00000423619 154 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 RPEP3-201ENST00000425462 676 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC093151.1-201ENST00000427711 313 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC090774.1-201ENST00000435925 246 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AL590399.6-201ENST00000446396 307 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 RPL37P6-201ENST00000460682 294 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC087884.1-201ENST00000469738 328 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC083829.1-201ENST00000503756 657 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC091868.1-201ENST00000508746 304 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC097486.1-201ENST00000515331 210 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 RNU6-699P-201ENST00000517081 110 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 GNAI2P1-201ENST00000541815 315 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 OR4H12P-201ENST00000556269 907 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 MIR5699-201ENST00000578903 90 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 PRR13P7-201ENST00000605538 430 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 SDR42E1P2-201ENST00000614861 481 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 RNA5SP439-201ENST00000617595 124 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 AC007792.1-201ENST00000623023 402 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 STX3-208ENST00000641815 3236 ntBASIC5.83□□□□□ -1.48
USP17L3A6NCW0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP17L3A6NCW0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC104118.1-201ENST00000607625 1589 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 RNU1-115P-201ENST00000365329 160 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AL354766.1-201ENST00000423396 542 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 PPP1R11P2-201ENST00000423543 382 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AL138785.1-201ENST00000425821 331 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 CBX3P6-201ENST00000430257 527 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 RPL29P29-201ENST00000448725 423 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 SNORD5.1-201ENST00000458800 75 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC116655.1-201ENST00000508324 901 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 RNU1-6P-201ENST00000516290 144 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 SNORD116.3-201ENST00000517176 78 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 RNU6-840P-201ENST00000517275 65 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC025423.5-201ENST00000550230 219 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AL161423.1-201ENST00000613700 262 ntBASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
USP17L3A6NCW0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC097063.1-201ENST00000426714 1797 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 RNU6-1249P-201ENST00000363237 111 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.188-201ENST00000363952 111 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 RNU6-45P-201ENST00000384471 107 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AL590704.1-201ENST00000402856 794 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms