Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL158071.4-201ENST00000608358 4125 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP52-201ENST00000362448 134 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP215-201ENST00000363440 122 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-666P-201ENST00000363499 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RACK1-201ENST00000376817 965 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-364P-201ENST00000384387 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORD38.2-201ENST00000384470 69 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR34A-201ENST00000385130 110 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR548U-201ENST00000390728 81 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TDGF1P4-201ENST00000401555 520 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SUMO2P12-201ENST00000405924 140 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL355796.1-201ENST00000406706 323 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP221-201ENST00000411271 103 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TMSB10P1-201ENST00000415070 132 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC244157.1-201ENST00000415642 163 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 BX276092.1-201ENST00000427368 251 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC023141.3-201ENST00000436698 278 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 HMGN2P20-201ENST00000437531 273 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL356133.1-201ENST00000444762 372 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RPL23AP28-201ENST00000448062 470 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 snoU13.17-201ENST00000458802 104 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU7-113P-201ENST00000459273 62 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL856P-201ENST00000461754 298 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL791P-201ENST00000467868 295 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL608P-201ENST00000492377 279 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 FTH1P24-201ENST00000503502 462 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC010409.2-201ENST00000505780 478 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ENPP7P11-201ENST00000505915 627 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP14-201ENST00000516000 329 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORA40.16-201ENST00000517238 121 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC091144.2-201ENST00000521717 433 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC144548.1-201ENST00000549577 324 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC005519.1-201ENST00000554490 601 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR4258-201ENST00000580920 91 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR548AE2-201ENST00000583456 67 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC090241.1-201ENST00000587732 621 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AP001017.1-201ENST00000591378 482 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC012676.2-201ENST00000619258 186 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC239859.6-201ENST00000622095 213 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR3120-201ENST00000636555 81 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 OR52B5P-204ENST00000641744 3467 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC107980.1-201ENST00000558671 3355 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms