Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 MTND5P24-201ENST00000438892 1767 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 OR5BR1P-201ENST00000524992 1330 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 U3.4-201ENST00000363352 213 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 RNU4-75P-201ENST00000364621 146 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.31□□□□□ -1.88
PKP2Q99959 Y_RNA.559-201ENST00000384686 107 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 MTCO2P5-201ENST00000422621 426 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.31□□□□□ -1.88
PKP2Q99959 OR8F1P-201ENST00000425243 930 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 RPL23AP82-202ENST00000427528 469 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.31□□□□□ -1.88
PKP2Q99959 USP9YP28-201ENST00000435142 589 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 FTH1P1-201ENST00000437933 532 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.31□□□□□ -1.88
PKP2Q99959 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.31□□□□□ -1.88
PKP2Q99959 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 VN1R104P-201ENST00000505115 1009 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC091965.2-201ENST00000512324 613 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
PKP2Q99959 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.31□□□□□ -1.88
PKP2Q99959 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.31□□□□□ -1.88
PKP2Q99959 U73023.1-201ENST00000603134 700 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC004987.4-201ENST00000603383 338 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC004853.1-201ENST00000604902 698 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AL031775.1-201ENST00000607014 887 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 AC092656.1-203ENST00000624134 423 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 AC012442.3-202ENST00000636742 206 ntBASIC3.31□□□□□ -1.88
PKP2Q99959 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PKP2Q99959 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKP2Q99959 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PKP2Q99959 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKP2Q99959 RPL21P132-201ENST00000331267 462 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RNU6-660P-201ENST00000364566 109 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 MIR493-201ENST00000385254 89 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 HMGB1P17-201ENST00000403495 628 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RNU2-43P-201ENST00000410306 190 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKP2Q99959 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 TRIM60P18-201ENST00000441518 828 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 MTCO1P19-201ENST00000443487 500 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RPL36AP33-201ENST00000450395 310 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RPL26P28-201ENST00000451325 435 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC104308.1-201ENST00000454621 333 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 USP9YP10-201ENST00000454868 628 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 RPL7P15-201ENST00000461190 712 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.3□□□□□ -1.88
PKP2Q99959 FTH1P21-201ENST00000512179 511 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC022447.1-201ENST00000515358 464 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.3□□□□□ -1.88
PKP2Q99959 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP2Q99959 AC055876.1-202ENST00000567053 138 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AGGF1P4-201ENST00000568249 801 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 OR4K8P-201ENST00000578842 1048 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 MIR3200-201ENST00000580767 85 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 AL596327.1-201ENST00000603629 213 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC019176.2-201ENST00000611579 315 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP2Q99959 AC026585.1-201ENST00000619582 524 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AC009878.1-201ENST00000621819 340 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 AL356266.1-201ENST00000623311 483 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.3□□□□□ -1.88
PKP2Q99959 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PKP2Q99959 AC005183.1-201ENST00000603687 1979 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP2Q99959 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKP2Q99959 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
PKP2Q99959 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKP2Q99959 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PKP2Q99959 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.29□□□□□ -1.88
PKP2Q99959 RNU6-433P-201ENST00000363216 104 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms