Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC012119.1-201ENST00000603184 222 ntBASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 AC135507.2-201ENST00000612443 309 ntBASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 AC025588.4-201ENST00000615802 908 ntBASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RFWD3Q6PCD5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 MTND5P7-201ENST00000413558 1798 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL391994.1-201ENST00000254724 282 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 RNU6-1200P-201ENST00000384162 107 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 Y_RNA.493-201ENST00000384422 102 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 RNU6-878P-201ENST00000384578 110 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 RNA5SP56-201ENST00000410277 118 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 PIGPP2-201ENST00000411569 458 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC109780.2-201ENST00000413467 845 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC098592.1-201ENST00000419352 333 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 HSPE1P1-201ENST00000421494 318 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL022400.1-201ENST00000423946 935 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC022018.1-201ENST00000430685 241 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC140076.1-201ENST00000449897 361 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC068724.1-201ENST00000487100 792 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 MRPS36P5-201ENST00000551909 298 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC107954.1-201ENST00000565906 727 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL669831.4-202ENST00000590817 238 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 VN1R92P-201ENST00000598511 928 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 IGHV3-29-201ENST00000604817 344 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC004832.5-201ENST00000608677 401 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AL590240.3-201ENST00000621416 943 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AC103706.2-201ENST00000638080 240 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 AP000526.1-201ENST00000603308 1388 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 DDX43P2-201ENST00000604753 1354 ntBASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFWD3Q6PCD5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 RNU5A-2P-201ENST00000384337 116 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL590084.2-201ENST00000401481 382 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL121972.1-201ENST00000402023 252 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 TXNL1P1-201ENST00000429528 554 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 MTND5P2-201ENST00000442927 1142 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 ARPC3P5-201ENST00000448802 534 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 RPL37P4-201ENST00000448908 268 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 snoU13.3-201ENST00000459441 104 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LINC00888-204ENST00000487386 421 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 RPS3AP22-201ENST00000488297 769 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC239860.2-201ENST00000525886 270 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 ISCA1P3-201ENST00000577104 373 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms