Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL020991.1-201ENST00000612314 373 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AL133173.2-201ENST00000614270 90 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC063943.3-201ENST00000615562 356 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 AC139792.3-201ENST00000623525 224 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 U6.98-201ENST00000637157 84 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 CASC19-280ENST00000642102 1351 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MTND5P33-201ENST00000571250 1450 ntBASIC4.21□□□□□ -1.74
DKK3Q9UBP4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
DKK3Q9UBP4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC067945.1-201ENST00000342609 618 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU4-1-201ENST00000363925 141 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU6-694P-201ENST00000364071 147 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNA5SP387-201ENST00000364226 106 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU6-282P-201ENST00000365357 103 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU6-359P-201ENST00000365466 108 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 ENSAP1-201ENST00000392855 326 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 MTND4LP20-201ENST00000402379 270 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU2-37P-201ENST00000410695 177 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AL356095.1-201ENST00000417217 199 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 ZNF90P2-204ENST00000419323 1075 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 PSMA6P3-201ENST00000428242 164 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 EZH2P1-201ENST00000431167 291 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 CKS1BP5-201ENST00000434172 273 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AL136097.1-201ENST00000456945 913 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU7-170P-201ENST00000459303 61 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC078785.3-201ENST00000476607 425 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC046134.1-201ENST00000514454 666 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 Y_RNA.704-201ENST00000516851 102 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 RNU4-60P-201ENST00000517239 135 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC023632.4-201ENST00000517783 191 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 MTND1P35-201ENST00000526739 508 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 SETP2-201ENST00000553886 926 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 FGF7P1-201ENST00000582820 288 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 AC060780.3-201ENST00000589464 80 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.2□□□□□ -1.74
DKK3Q9UBP4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DKK3Q9UBP4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 NUP58P1-201ENST00000502546 1738 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 OR5J1P-201ENST00000313544 939 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RNU5E-1-201ENST00000362477 120 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 Y_RNA.38-201ENST00000362617 102 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RNA5SP258-201ENST00000362750 119 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 Y_RNA.159-201ENST00000363674 87 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 SNORD46.1-201ENST00000364139 104 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RNU6-877P-201ENST00000383868 107 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RNU1-13P-201ENST00000384499 162 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RNU6-628P-201ENST00000410675 107 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RPS23P10-201ENST00000416185 486 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RPS15AP40-201ENST00000419621 391 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AC245054.1-201ENST00000420944 258 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 PSMA2P3-201ENST00000429685 675 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 MTND3P23-201ENST00000431980 347 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AC108734.1-201ENST00000439549 399 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 CALM1P1-201ENST00000442082 433 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 USP9YP15-201ENST00000442391 422 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 HSFY6P-201ENST00000445573 403 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.19□□□□□ -1.74
DKK3Q9UBP4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.19□□□□□ -1.74
DKK3Q9UBP4 AP000852.1-201ENST00000472460 573 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms