Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 snoU13.4-201ENST00000458916 104 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 HSPE1P6-201ENST00000479457 291 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 RPL21P99-201ENST00000480369 423 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 RN7SL810P-201ENST00000493031 276 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 RNU6-352P-201ENST00000516908 107 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 PSMA2P1-201ENST00000526365 646 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AP000827.1-201ENST00000527814 258 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AL138976.2-201ENST00000563989 694 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AC136624.4-201ENST00000573044 370 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AP001350.1-201ENST00000601906 1524 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 BDH2P1-201ENST00000602288 736 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 DPPA3P3-201ENST00000603842 430 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AC104763.2-201ENST00000604179 382 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AL590392.1-201ENST00000604960 446 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AL670379.4-201ENST00000605279 254 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AL731566.1-201ENST00000620490 1937 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 AL360181.4-201ENST00000621752 134 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 OR52H1-202ENST00000641796 1061 ntBASIC4.59□□□□□ -1.67
FNDC3BQ53EP0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
FNDC3BQ53EP0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
FNDC3BQ53EP0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 SNORA32.2-201ENST00000384049 122 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 RPL30P2-201ENST00000414021 291 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 RSL24D1P6-201ENST00000426934 401 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 CALM2P2-201ENST00000428512 440 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 HMGB1P27-201ENST00000431429 603 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 MTND1P11-201ENST00000456661 876 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 HMGB1P22-201ENST00000505315 124 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AP006587.4-201ENST00000526053 529 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AC243972.3-201ENST00000539655 198 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 TOMM20P2-201ENST00000540082 421 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 MIR3939-201ENST00000582614 106 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 FGF7P1-201ENST00000582820 288 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 ARF4P1-201ENST00000605447 541 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 AP001486.3-201ENST00000615334 372 ntBASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.58□□□□□ -1.68
FNDC3BQ53EP0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AL157700.1-201ENST00000561973 1432 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 MTND4P29-201ENST00000503122 1372 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 Y_RNA.231-201ENST00000364358 102 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 SNORA36C-201ENST00000384289 132 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 HSPD1P16-201ENST00000402302 394 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNA5SP111-201ENST00000411386 101 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC011933.1-201ENST00000413334 321 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RPL7P46-201ENST00000425129 740 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RPS29P17-201ENST00000430795 166 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 ERLEC1P1-201ENST00000433806 578 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RPL7P12-201ENST00000446719 750 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC020550.1-201ENST00000447385 163 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNU6-953P-201ENST00000459154 107 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC116533.1-201ENST00000459748 321 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RN7SL303P-201ENST00000469773 251 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC010618.1-201ENST00000469924 477 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 S100A11P1-201ENST00000477525 312 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AL049874.1-201ENST00000489560 388 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC020890.1-201ENST00000491837 504 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNU6-123P-201ENST00000516163 102 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNA5SP360-201ENST00000516555 118 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNU6-677P-201ENST00000516914 101 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.57□□□□□ -1.68
FNDC3BQ53EP0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms