Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIR526A2-201ENST00000390198 65 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-1228P-201ENST00000391014 107 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-710P-201ENST00000410424 105 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.59□□□□□ -1.35
NUBP1P53384 AC079780.1-201ENST00000428259 207 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.59□□□□□ -1.35
NUBP1P53384 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.59□□□□□ -1.35
NUBP1P53384 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
NUBP1P53384 RN7SL208P-201ENST00000577964 296 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 MIR4489-201ENST00000578869 62 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 AC053481.4-201ENST00000583164 216 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.59□□□□□ -1.35
NUBP1P53384 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.59□□□□□ -1.35
NUBP1P53384 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NUBP1P53384 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.59□□□□□ -1.35
NUBP1P53384 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NUBP1P53384 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NUBP1P53384 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NUBP1P53384 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.59□□□□□ -1.36
NUBP1P53384 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NUBP1P53384 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NUBP1P53384 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC6.59□□□□□ -1.36
NUBP1P53384 ZNF702P-202ENST00000434269 1966 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NUBP1P53384 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NUBP1P53384 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.58□□□□□ -1.36
NUBP1P53384 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NUBP1P53384 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 AL359195.2-201ENST00000623657 4412 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NUBP1P53384 AC092268.1-201ENST00000342691 405 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 SNORD56.1-201ENST00000362913 68 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 Y_RNA.251-201ENST00000364551 99 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 MIR153-1-201ENST00000384914 90 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 MIR888-201ENST00000401186 77 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 RN7SKP61-201ENST00000410642 295 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.58□□□□□ -1.36
NUBP1P53384 AIMP1P2-201ENST00000425294 312 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AC078809.1-201ENST00000427601 140 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.58□□□□□ -1.36
NUBP1P53384 TDGF1P1-201ENST00000445734 527 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AL445665.1-202ENST00000452436 324 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 snoU13.6-201ENST00000458785 104 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 Y_RNA.651-201ENST00000459380 103 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AC063943.2-201ENST00000495697 534 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AP000620.1-201ENST00000527147 504 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.58□□□□□ -1.36
NUBP1P53384 AL390726.5-202ENST00000564800 256 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 AL445567.2-201ENST00000618935 498 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 LINC02495-203ENST00000636704 242 ntBASIC6.58□□□□□ -1.36
NUBP1P53384 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.58□□□□□ -1.36
NUBP1P53384 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NUBP1P53384 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NUBP1P53384 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NUBP1P53384 AC008555.1-201ENST00000561778 2757 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 AC008555.8-201ENST00000623602 2168 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.57□□□□□ -1.36
NUBP1P53384 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NUBP1P53384 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.57□□□□□ -1.36
NUBP1P53384 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.57□□□□□ -1.36
NUBP1P53384 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NUBP1P53384 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.57□□□□□ -1.36
NUBP1P53384 RNA5SP477-201ENST00000362639 119 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 RNU6-1285P-201ENST00000363480 105 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 RNY4P30-201ENST00000410216 95 ntBASIC6.57□□□□□ -1.36
NUBP1P53384 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NUBP1P53384 CYCSP52-201ENST00000422857 310 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms