Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC093591.2-201ENST00000565254 3843 ntBASIC4.7□□□□□ -1.66
LTBRP36941 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBRP36941 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.7□□□□□ -1.66
LTBRP36941 MIR5583-1-201ENST00000580941 59 ntBASIC4.7□□□□□ -1.66
LTBRP36941 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBRP36941 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.7□□□□□ -1.66
LTBRP36941 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 AC008638.3-201ENST00000603341 463 ntBASIC4.7□□□□□ -1.66
LTBRP36941 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBRP36941 TUG1_2.1-201ENST00000614234 87 ntBASIC4.7□□□□□ -1.66
LTBRP36941 uc_338.15-201ENST00000615470 191 ntBASIC4.7□□□□□ -1.66
LTBRP36941 MIR6875-201ENST00000617506 72 ntBASIC4.7□□□□□ -1.66
LTBRP36941 SNHG22-203ENST00000617833 660 ntBASIC4.7□□□□□ -1.66
LTBRP36941 AC039056.2-201ENST00000622261 511 ntBASIC4.7□□□□□ -1.66
LTBRP36941 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBRP36941 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LTBRP36941 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LTBRP36941 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
LTBRP36941 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.7□□□□□ -1.66
LTBRP36941 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LTBRP36941 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
LTBRP36941 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.69□□□□□ -1.66
LTBRP36941 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LTBRP36941 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 SNORA68.2-201ENST00000391263 128 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AL592114.1-201ENST00000403842 483 ntBASIC4.69□□□□□ -1.66
LTBRP36941 RAC1P6-201ENST00000423911 575 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AL353729.1-201ENST00000425044 720 ntBASIC4.69□□□□□ -1.66
LTBRP36941 CKS1BP5-201ENST00000434172 273 ntBASIC4.69□□□□□ -1.66
LTBRP36941 MRPS18BP2-201ENST00000434310 759 ntBASIC4.69□□□□□ -1.66
LTBRP36941 RPL23AP52-201ENST00000439311 478 ntBASIC4.69□□□□□ -1.66
LTBRP36941 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 RN7SL432P-201ENST00000484057 298 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 RN7SL691P-201ENST00000494487 301 ntBASIC4.69□□□□□ -1.66
LTBRP36941 RPL23AP55-201ENST00000498163 452 ntBASIC4.69□□□□□ -1.66
LTBRP36941 CCDC34P1-201ENST00000507441 517 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.69□□□□□ -1.66
LTBRP36941 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LTBRP36941 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 AP001804.3-201ENST00000525146 880 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.69□□□□□ -1.66
LTBRP36941 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.69□□□□□ -1.66
LTBRP36941 RN7SL703P-201ENST00000578485 302 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AL133215.3-201ENST00000609801 448 ntBASIC4.69□□□□□ -1.66
LTBRP36941 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 AL365204.3-201ENST00000612448 685 ntBASIC4.69□□□□□ -1.66
LTBRP36941 U73479.1-201ENST00000618062 168 ntBASIC4.69□□□□□ -1.66
LTBRP36941 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.69□□□□□ -1.66
LTBRP36941 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.69□□□□□ -1.66
LTBRP36941 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.69□□□□□ -1.66
LTBRP36941 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
LTBRP36941 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LTBRP36941 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LTBRP36941 BTBD10P1-201ENST00000549824 1352 ntBASIC4.68□□□□□ -1.66
LTBRP36941 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LTBRP36941 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LTBRP36941 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LTBRP36941 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LTBRP36941 SNORD46.1-201ENST00000364139 104 ntBASIC4.68□□□□□ -1.66
LTBRP36941 Y_RNA.259-201ENST00000364619 101 ntBASIC4.68□□□□□ -1.66
LTBRP36941 RNA5SP513-201ENST00000364648 118 ntBASIC4.68□□□□□ -1.66
LTBRP36941 Y_RNA.301-201ENST00000364990 103 ntBASIC4.68□□□□□ -1.66
LTBRP36941 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBRP36941 RNU6-1013P-201ENST00000384180 107 ntBASIC4.68□□□□□ -1.66
LTBRP36941 MIR135A2-201ENST00000384854 100 ntBASIC4.68□□□□□ -1.66
LTBRP36941 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LTBRP36941 AP000580.1-201ENST00000404439 358 ntBASIC4.68□□□□□ -1.66
LTBRP36941 RNU4-46P-201ENST00000410818 138 ntBASIC4.68□□□□□ -1.66
LTBRP36941 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBRP36941 RPS7P15-201ENST00000415804 584 ntBASIC4.68□□□□□ -1.66
LTBRP36941 BTF3L4P3-201ENST00000418879 476 ntBASIC4.68□□□□□ -1.66
LTBRP36941 RPL7P46-201ENST00000425129 740 ntBASIC4.68□□□□□ -1.66
LTBRP36941 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.68□□□□□ -1.66
LTBRP36941 RPL7P2-201ENST00000427639 268 ntBASIC4.68□□□□□ -1.66
LTBRP36941 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.68□□□□□ -1.66
LTBRP36941 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.68□□□□□ -1.66
LTBRP36941 KCTD9P3-201ENST00000434597 1169 ntBASIC4.68□□□□□ -1.66
LTBRP36941 AC007389.2-201ENST00000434630 306 ntBASIC4.68□□□□□ -1.66
LTBRP36941 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.68□□□□□ -1.66
LTBRP36941 RPL23AP33-201ENST00000442301 452 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms