Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC010186.2-204ENST00000537668 439 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC093023.1-201ENST00000547375 507 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC007494.1-201ENST00000562293 760 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 RBBP8P1-201ENST00000449447 1844 ntBASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL25A1Q9BXS0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 XIAPP3-201ENST00000312918 795 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.111-201ENST00000363248 100 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RNU6-1255P-201ENST00000363434 112 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 CBX1P3-201ENST00000413296 527 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC092162.1-201ENST00000432828 434 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC005094.1-201ENST00000440420 368 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 SNORD121B-201ENST00000458838 81 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RNU1-88P-201ENST00000459274 128 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RPS23P2-201ENST00000463671 415 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RN7SL542P-201ENST00000467147 294 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AP000926.1-201ENST00000479573 241 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC098583.1-201ENST00000480875 255 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC074250.1-201ENST00000511117 192 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 MIR2117-201ENST00000516780 80 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RNU6-798P-201ENST00000516912 103 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 MIR2116-201ENST00000517221 80 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC073916.1-201ENST00000545095 130 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC027288.2-201ENST00000553028 243 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AL591516.1-201ENST00000611326 274 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 uc_338.9-201ENST00000617424 182 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 MTND1P7-201ENST00000632801 297 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 PWAR1-201ENST00000624188 2414 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 AP004607.3-201ENST00000530354 3915 ntBASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL25A1Q9BXS0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 SNORA71.3-201ENST00000362582 128 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.441-201ENST00000384123 112 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 MIR130A-201ENST00000385274 89 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC007098.1-201ENST00000420122 367 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC007389.2-201ENST00000434630 306 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 RPL21P103-201ENST00000479921 488 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC010469.2-201ENST00000496412 480 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 RPS17P5-201ENST00000498293 408 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC095057.1-201ENST00000507583 168 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 RNU6-844P-201ENST00000517175 102 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC104576.1-201ENST00000524225 88 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 MIR5095-201ENST00000578844 88 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 MIR5701-3-201ENST00000578890 82 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 MIR4311-201ENST00000580794 100 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 RN7SL690P-201ENST00000582087 240 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms