Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ACTBP12-201ENST00000435871 418 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL450023.3-201ENST00000440592 271 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 Z75741.1-201ENST00000446793 314 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 REG1CP-206ENST00000447469 496 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL23AP7-203ENST00000449021 469 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 snoU13.7-201ENST00000459220 104 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CENPBD1P1-201ENST00000464061 469 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC022730.2-201ENST00000465359 452 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL263P-201ENST00000467969 290 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL368P-201ENST00000473384 277 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL799P-201ENST00000475891 298 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL130P-201ENST00000489463 305 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL78P-201ENST00000495193 281 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL516P-201ENST00000496127 297 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MYL5-205ENST00000505477 584 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1073P-201ENST00000517182 106 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 IGLVI-70-201ENST00000523272 390 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 IGKV2D-19-201ENST00000523346 262 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 COX5AP2-201ENST00000554418 394 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC00555-201ENST00000569288 442 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PDLIM1P3-201ENST00000582370 599 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC007448.1-201ENST00000582714 234 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR3972-201ENST00000582732 87 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC104996.3-201ENST00000590718 94 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC243960.5-201ENST00000597858 255 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL138895.2-201ENST00000603019 178 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL356157.2-201ENST00000605122 111 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC013412.1-201ENST00000610687 192 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL162377.2-201ENST00000624532 337 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL049833.3-201ENST00000623920 3738 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 AL442644.1-201ENST00000454390 3105 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 GUCY2GP-201ENST00000479705 3222 ntBASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms