Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MFSD8-242ENST00000641690 4199 ntBASIC4.12□□□□□ -1.75
CPEB3Q8NE35 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CPEB3Q8NE35 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL672167.1-205ENST00000641112 3080 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL139276.1-201ENST00000311910 1001 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC067945.1-201ENST00000342609 618 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RNU6-552P-201ENST00000362869 119 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RNU6-522P-201ENST00000364497 107 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RNA5SP87-201ENST00000384155 118 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 Z98745.1-201ENST00000402553 494 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RPS4XP9-201ENST00000405151 780 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL591848.1-201ENST00000413092 322 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RPS7P15-201ENST00000415804 584 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 HSPE1P1-201ENST00000421494 318 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 NIPA2P5-201ENST00000452282 464 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 ZFRP1-201ENST00000457579 2970 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 SNORD19B-201ENST00000459623 84 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RPL35AP28-201ENST00000459730 331 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RPS20P21-201ENST00000466859 343 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 IGLV2-34-201ENST00000490007 283 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC092436.1-201ENST00000506450 503 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RN7SKP256-201ENST00000517201 314 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 CDH12P4-201ENST00000517835 295 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 CDH12P3-201ENST00000517935 295 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 CDH12P1-201ENST00000518435 295 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 DEFB109D-201ENST00000529497 240 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 MIR4775-201ENST00000581168 75 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 MIR4270-201ENST00000581799 70 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC090948.1-201ENST00000607464 549 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL031666.3-201ENST00000609320 1006 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL133216.2-202ENST00000634512 349 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 DHX9P1-201ENST00000436565 3076 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 AL136164.3-201ENST00000624429 3978 ntBASIC4.11□□□□□ -1.75
CPEB3Q8NE35 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPEB3Q8NE35 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MTND5P3-201ENST00000438536 1800 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 Y_RNA.100-201ENST00000363141 102 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 Y_RNA.384-201ENST00000383909 102 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RNU6-903P-201ENST00000391270 109 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 ENSAP1-201ENST00000392855 326 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AP000580.1-201ENST00000404439 358 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RPL37P18-201ENST00000411602 243 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RPS15AP40-201ENST00000419621 391 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AL451054.2-201ENST00000420896 202 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RPL36AP10-201ENST00000421785 322 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC018630.2-202ENST00000422992 927 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 CHIAP3-201ENST00000423668 1133 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RPL30P3-201ENST00000424262 333 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 OR2AS1P-201ENST00000427827 319 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC016831.4-201ENST00000438302 307 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 TDGF1P1-201ENST00000445734 527 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AL590639.1-201ENST00000456484 337 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RNU7-182P-201ENST00000459009 62 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 RPL21P99-201ENST00000480369 423 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 FAM206BP-201ENST00000510179 541 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AP000857.1-201ENST00000532151 543 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MIR4424-201ENST00000585257 86 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms