Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC128687.1-201ENST00000605304 619 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 BNIP3P7-201ENST00000605641 516 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 AL450472.3-201ENST00000615578 367 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 AL031601.2-202ENST00000622650 282 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 DUXAP9-208ENST00000622815 614 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 CR381572.1-201ENST00000625098 102 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.84□□□□□ -2.11
COMMD3Q9UBI1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
COMMD3Q9UBI1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
COMMD3Q9UBI1 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 SNORD46.1-201ENST00000364139 104 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 RNU6-98P-201ENST00000384173 107 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC019097.1-201ENST00000424783 735 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL513175.1-201ENST00000431492 780 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL590762.3-201ENST00000436372 640 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC096751.1-202ENST00000502691 1067 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AP001804.3-201ENST00000525146 880 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC126177.3-201ENST00000551839 688 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL138976.2-201ENST00000563989 694 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 MIR4504-201ENST00000577413 92 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AL356280.1-201ENST00000603614 379 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC245100.7-201ENST00000609678 442 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 AC008669.1-201ENST00000565823 2178 ntBASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.83□□□□□ -2.12
COMMD3Q9UBI1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 HMGB1P5-201ENST00000255320 642 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 RNU6-1072P-201ENST00000384703 107 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 RNU6-443P-201ENST00000384780 107 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC063976.3-201ENST00000426849 329 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 MYL8P-204ENST00000431574 518 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 USP9YP8-201ENST00000441913 500 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 SNRPGP6-201ENST00000451124 220 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC011825.1-201ENST00000484967 388 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 RPS15AP34-201ENST00000487776 387 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 OR5BM1P-201ENST00000512021 366 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AP000867.2-201ENST00000532468 320 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 SNRPGP16-201ENST00000533275 226 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AP001330.4-201ENST00000604350 154 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 AL136363.1-201ENST00000605349 337 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 OR2AS2P-201ENST00000606902 342 ntBASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
COMMD3Q9UBI1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 RNU5D-1-201ENST00000363299 116 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 RNF2P1-201ENST00000442955 1010 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AC010099.1-201ENST00000455434 375 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AL139109.1-201ENST00000455491 297 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AL359385.1-201ENST00000456509 365 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 AC107398.1-201ENST00000486904 505 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 RN7SL636P-201ENST00000497504 294 ntBASIC1.81□□□□□ -2.12
COMMD3Q9UBI1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms