Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 MIR483-201ENST00000385070 76 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 MYL6P5-201ENST00000412707 459 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC093414.1-201ENST00000434712 514 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 GSTM5P1-201ENST00000434751 660 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC073410.1-201ENST00000435125 589 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 REG1CP-206ENST00000447469 496 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL139099.1-201ENST00000497398 403 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 YWHAEP4-201ENST00000505390 198 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC026726.1-201ENST00000512859 601 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 RNU6-64P-201ENST00000517119 105 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC034102.8-201ENST00000615146 484 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AL596275.2-204ENST00000641628 552 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 RLIMP1-201ENST00000339626 1680 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 ZNF402P-201ENST00000404435 3100 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC008725.1-201ENST00000605123 2263 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 AC022034.1-201ENST00000512867 2156 ntBASIC5.55□□□□□ -1.52
COL25A1Q9BXS0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 Z75746.1-201ENST00000440243 2080 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC105749.1-201ENST00000631338 2008 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC138393.1-203ENST00000327086 343 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 SNORA69.1-201ENST00000390904 137 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RNU6-131P-201ENST00000391144 107 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 MIR298-201ENST00000401212 88 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RNA5SP113-201ENST00000410486 84 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RN7SKP177-201ENST00000410567 355 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RPL23AP36-201ENST00000413895 458 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 PRSS3P4-201ENST00000453323 162 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC018437.1-201ENST00000492214 406 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC126615.2-201ENST00000553003 515 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RPL23AP84-201ENST00000571193 464 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 AL591926.8-201ENST00000616876 211 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 PABPC1P8-201ENST00000452851 2086 ntBASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL25A1Q9BXS0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.343-201ENST00000365354 112 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 RNU6-1329P-201ENST00000365664 107 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 RNU6-658P-201ENST00000384606 106 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.568-201ENST00000384742 113 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 MIR600-201ENST00000385007 98 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 PRRC2CP1-201ENST00000404428 159 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.592-201ENST00000410274 109 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 BX842559.1-201ENST00000419615 532 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 DAP3P1-201ENST00000441522 278 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 AC008267.6-201ENST00000441664 139 ntBASIC5.53□□□□□ -1.52
COL25A1Q9BXS0 RPL23AP81-201ENST00000455252 467 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms