Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AC015799.1-201ENST00000622996 3122 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 MIR450A1-201ENST00000362262 91 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 RNA5SP375-201ENST00000362975 119 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 SNORD82-201ENST00000365530 70 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 RNU6-318P-201ENST00000384283 103 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 MIR578-201ENST00000384828 96 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 MIR105-2-201ENST00000385083 81 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 Z82210.1-201ENST00000440037 231 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 AC117440.1-201ENST00000474107 571 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 AC009120.1-201ENST00000493458 473 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 SNORA40.9-201ENST00000515895 93 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 RNU6-352P-201ENST00000516908 107 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 MIR4489-201ENST00000578869 62 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 RNU4ATAC-201ENST00000580972 127 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 COX6CP7-201ENST00000597056 208 ntBASIC6.49□□□□□ -1.37
VARS2Q5ST30 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VARS2Q5ST30 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
VARS2Q5ST30 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VARS2Q5ST30 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VARS2Q5ST30 AC011504.1-201ENST00000623331 4103 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 AC007685.1-201ENST00000329806 452 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 RNU6-245P-201ENST00000384020 107 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 Y_RNA.558-201ENST00000384685 113 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 RN7SKP286-201ENST00000410894 299 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 RPL21P13-201ENST00000488305 481 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 ATP5LP3-201ENST00000514223 304 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 AP006245.2-201ENST00000522004 300 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 CARD18-203ENST00000532895 422 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 AC024940.3-201ENST00000538551 316 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 MIR4700-201ENST00000578311 74 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 AP005403.1-201ENST00000579720 229 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 AL352984.2-202ENST00000613699 155 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 TCL6_3.1-201ENST00000619064 137 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 U6.95-201ENST00000636931 70 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.48□□□□□ -1.37
VARS2Q5ST30 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VARS2Q5ST30 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VARS2Q5ST30 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VARS2Q5ST30 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VARS2Q5ST30 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VARS2Q5ST30 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VARS2Q5ST30 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
VARS2Q5ST30 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.47□□□□□ -1.37
VARS2Q5ST30 AC110373.1-201ENST00000505994 3505 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VARS2Q5ST30 U3.6-201ENST00000363622 211 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 RNU105B-201ENST00000364478 208 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 RNU6-1226P-201ENST00000384317 107 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 RNU6-460P-201ENST00000391158 108 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 RPS4XP3-201ENST00000398541 413 ntBASIC6.47□□□□□ -1.37
VARS2Q5ST30 AC245884.2-201ENST00000426257 404 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms