Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 TSPY7P-201ENST00000431358 1114 ntBASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CLCA3PQ9Y6N3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 AL596275.1-201ENST00000423464 877 ntBASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 AC026471.5-201ENST00000615068 467 ntBASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCA3PQ9Y6N3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCA3PQ9Y6N3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 AL160286.2-201ENST00000567150 934 ntBASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 AL158211.5-201ENST00000623583 2518 ntBASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CLCA3PQ9Y6N3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 TREX1-205ENST00000625293 1783 ntBASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 NUDT16P1-203ENST00000513809 620 ntBASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms