Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.73■□□□□ 0.59
CSNK1G3Q9Y6M4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AP000523.1-201ENST00000398242 1049 ntBASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 AL358472.4-201ENST00000633140 710 ntBASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSNK1G3Q9Y6M4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CSNK1G3Q9Y6M4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms