Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB1Q9Y5F3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB1Q9Y5F3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB1Q9Y5F3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 TERF1P1-201ENST00000311003 1181 ntBASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 NAPSB-206ENST00000562112 1266 ntBASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 CR392000.1-201ENST00000624770 1228 ntBASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB1Q9Y5F3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 AL137013.1-201ENST00000432946 1228 ntBASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB1Q9Y5F3 AC010947.1-201ENST00000623454 693 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms