Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 AC116562.2-201ENST00000507042 360 ntBASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 AC008550.1-201ENST00000511500 884 ntBASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 NUDT16P1-203ENST00000513809 620 ntBASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGC3Q9UN70 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGC3Q9UN70 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGC3Q9UN70 TNXA-203ENST00000507684 2038 ntBASIC20.2■□□□□ 0.83
PCDHGC3Q9UN70 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 MIR718-201ENST00000390190 70 ntBASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGC3Q9UN70 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 AC006333.2-201ENST00000607957 2099 ntBASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGC3Q9UN70 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms