Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BX664615.1-201ENST00000443558 458 ntBASIC17.57■□□□□ 0.4
LRFN1Q9P244 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 DUX4L26-201ENST00000489078 1255 ntBASIC17.57■□□□□ 0.4
LRFN1Q9P244 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRFN1Q9P244 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN1Q9P244 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRFN1Q9P244 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN1Q9P244 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.55■□□□□ 0.4
LRFN1Q9P244 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN1Q9P244 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN1Q9P244 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 AL512604.3-201ENST00000569583 964 ntBASIC17.54■□□□□ 0.4
LRFN1Q9P244 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 AC006011.2-201ENST00000621313 1158 ntBASIC17.54■□□□□ 0.4
LRFN1Q9P244 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN1Q9P244 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN1Q9P244 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRFN1Q9P244 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LRFN1Q9P244 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.53■□□□□ 0.4
LRFN1Q9P244 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRFN1Q9P244 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN1Q9P244 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN1Q9P244 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRFN1Q9P244 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms