Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.62■□□□□ 0.89
CNTN3Q9P232 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTN3Q9P232 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.62■□□□□ 0.89
CNTN3Q9P232 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTN3Q9P232 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.61■□□□□ 0.89
CNTN3Q9P232 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTN3Q9P232 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTN3Q9P232 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 AP003041.3-201ENST00000527151 707 ntBASIC20.6■□□□□ 0.89
CNTN3Q9P232 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.6■□□□□ 0.89
CNTN3Q9P232 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNTN3Q9P232 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNTN3Q9P232 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 MIR1224-201ENST00000408193 85 ntBASIC20.59■□□□□ 0.89
CNTN3Q9P232 LIN28AP1-201ENST00000429574 405 ntBASIC20.59■□□□□ 0.89
CNTN3Q9P232 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTN3Q9P232 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTN3Q9P232 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTN3Q9P232 TEX21P-204ENST00000641479 1693 ntBASIC20.58■□□□□ 0.89
CNTN3Q9P232 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTN3Q9P232 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTN3Q9P232 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTN3Q9P232 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 AC010331.1-201ENST00000611423 582 ntBASIC20.58■□□□□ 0.89
CNTN3Q9P232 AL138966.2-201ENST00000621997 464 ntBASIC20.58■□□□□ 0.89
CNTN3Q9P232 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.58■□□□□ 0.89
CNTN3Q9P232 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTN3Q9P232 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTN3Q9P232 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.58■□□□□ 0.88
CNTN3Q9P232 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms