Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 KRT17P1-201ENST00000399211 1546 ntBASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPTLC3Q9NUV7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 AC006015.1-201ENST00000429970 570 ntBASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPTLC3Q9NUV7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 AC010980.2-201ENST00000587099 1412 ntBASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPTLC3Q9NUV7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 AC093787.1-201ENST00000450396 207 ntBASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 AC023632.3-201ENST00000521633 145 ntBASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 AC008694.1-202ENST00000636953 945 ntBASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.05■□□□□ 0.96
SPTLC3Q9NUV7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 AL589743.5-201ENST00000616611 1050 ntBASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms