Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HPS4Q9NQG7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 AL391422.3-201ENST00000603791 2761 ntBASIC19.79■□□□□ 0.76
HPS4Q9NQG7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.79■□□□□ 0.76
HPS4Q9NQG7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 AC092647.4-201ENST00000457211 535 ntBASIC19.79■□□□□ 0.76
HPS4Q9NQG7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 AC091076.1-201ENST00000610741 619 ntBASIC19.79■□□□□ 0.76
HPS4Q9NQG7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS4Q9NQG7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 AL023973.1-201ENST00000624619 620 ntBASIC19.78■□□□□ 0.76
HPS4Q9NQG7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS4Q9NQG7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 KRT8P11-201ENST00000409686 1436 ntBASIC19.77■□□□□ 0.76
HPS4Q9NQG7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 AL441883.1-201ENST00000566170 1045 ntBASIC19.77■□□□□ 0.76
HPS4Q9NQG7 AL512604.3-201ENST00000569583 964 ntBASIC19.77■□□□□ 0.76
HPS4Q9NQG7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS4Q9NQG7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.77■□□□□ 0.75
HPS4Q9NQG7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
HPS4Q9NQG7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HPS4Q9NQG7 KRT8P45-201ENST00000414328 1447 ntBASIC19.76■□□□□ 0.75
HPS4Q9NQG7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms