Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.76■□□□□ 0.91
NLRC4Q9NPP4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NLRC4Q9NPP4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 RNA5SP413-201ENST00000516373 109 ntBASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NLRC4Q9NPP4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 PRKY-204ENST00000533551 1019 ntBASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 AC104581.1-202ENST00000635932 2618 ntBASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NLRC4Q9NPP4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 NBPF21P-201ENST00000425093 1451 ntBASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms