Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.37■□□□□ 0.21
GCM1Q9NP62 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 AC131212.4-201ENST00000623606 975 ntBASIC16.37■□□□□ 0.21
GCM1Q9NP62 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 MIR4785-201ENST00000585005 73 ntBASIC16.36■□□□□ 0.21
GCM1Q9NP62 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.36■□□□□ 0.21
GCM1Q9NP62 AL031985.4-201ENST00000642138 673 ntBASIC16.36■□□□□ 0.21
GCM1Q9NP62 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GCM1Q9NP62 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 LINC01465-201ENST00000408887 1940 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AC004980.1-204ENST00000429707 299 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 AL355355.2-201ENST00000442321 338 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AL160286.2-201ENST00000567150 934 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 AC026471.5-201ENST00000615068 467 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 ZNF815P-204ENST00000434898 1737 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 KRT17P2-201ENST00000300992 1314 ntBASIC16.35■□□□□ 0.21
GCM1Q9NP62 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GCM1Q9NP62 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.35■□□□□ 0.21
GCM1Q9NP62 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 NUDT16P1-203ENST00000513809 620 ntBASIC16.34■□□□□ 0.21
GCM1Q9NP62 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GCM1Q9NP62 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 AC026271.3-201ENST00000571884 352 ntBASIC16.34■□□□□ 0.21
GCM1Q9NP62 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.34■□□□□ 0.21
GCM1Q9NP62 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms