Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF3Q9HD45 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF3Q9HD45 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 UPK3BP1-201ENST00000428678 509 ntBASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 AC092647.4-201ENST00000457211 535 ntBASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 AL353719.1-201ENST00000566847 864 ntBASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 AC141257.4-201ENST00000634557 245 ntBASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 AC136944.6-201ENST00000634818 245 ntBASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF3Q9HD45 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF3Q9HD45 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF3Q9HD45 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF3Q9HD45 LINC01465-201ENST00000408887 1940 ntBASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF3Q9HD45 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 AL031133.1-201ENST00000406807 723 ntBASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF3Q9HD45 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 CA15P1-201ENST00000481698 905 ntBASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 AC011558.1-201ENST00000623459 338 ntBASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF3Q9HD45 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TM9SF3Q9HD45 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TM9SF3Q9HD45 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms