Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 AC135050.7-201ENST00000624508 2218 ntBASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 UNC93B4-201ENST00000505679 747 ntBASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 AC142086.2-201ENST00000569753 217 ntBASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBB1Q9H4B7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
TUBB1Q9H4B7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
TUBB1Q9H4B7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.46■□□□□ 0.54
TUBB1Q9H4B7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 AC133041.1-202ENST00000642053 222 ntBASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBB1Q9H4B7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TUBB1Q9H4B7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms