Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 AC116562.2-201ENST00000507042 360 ntBASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 AC093827.2-201ENST00000512654 315 ntBASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 MIR4785-201ENST00000585005 73 ntBASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 AC130371.2-201ENST00000619443 611 ntBASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 MESTP1-201ENST00000404287 994 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 TSPY7P-201ENST00000431358 1114 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 TSPY23P-201ENST00000440136 739 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 SNORA78-201ENST00000459373 127 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 AC011506.1-201ENST00000474329 610 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 AC066615.1-201ENST00000640911 628 ntBASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR1EQ9GZS1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 FAM207BP-201ENST00000447172 505 ntBASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 AP003071.4-201ENST00000562276 1284 ntBASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
POLR1EQ9GZS1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 PRSS44-201ENST00000515154 1146 ntBASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 MIR4497-201ENST00000583208 89 ntBASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 REXO1L12P-201ENST00000622156 912 ntBASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR1EQ9GZS1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms