Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 AP002383.4-201ENST00000442518 975 ntBASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTFDC1Q9BY42 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.28■■□□□ 1.32
RTFDC1Q9BY42 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 AL121672.3-201ENST00000608644 468 ntBASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 GPAT2P1-201ENST00000444924 1672 ntBASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
RTFDC1Q9BY42 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 PRELID1P1-202ENST00000567272 903 ntBASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTFDC1Q9BY42 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RTFDC1Q9BY42 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 KRT17P6-201ENST00000453795 1220 ntBASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 BX276092.5-203ENST00000456199 560 ntBASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 UNC93B7-201ENST00000509439 705 ntBASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 AC024243.1-201ENST00000609234 778 ntBASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTFDC1Q9BY42 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms