Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 AC068880.1-201ENST00000507289 2297 ntBASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 TSPY21P-201ENST00000433481 731 ntBASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.19■□□□□ 0.98
BPIFA3Q9BQP9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 MIPEPP3-201ENST00000412105 444 ntBASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 AC073111.5-205ENST00000641717 521 ntBASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 AL162741.1-201ENST00000565563 1558 ntBASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.18■□□□□ 0.98
BPIFA3Q9BQP9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 PCDHB18P-201ENST00000524813 2368 ntBASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AL162430.1-201ENST00000480705 870 ntBASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AC092118.2-201ENST00000613495 667 ntBASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 AC018470.1-201ENST00000624790 3129 ntBASIC21.17■□□□□ 0.98
BPIFA3Q9BQP9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 AC091874.3-201ENST00000512672 1195 ntBASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 AC022517.1-201ENST00000592429 346 ntBASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 AL121829.2-201ENST00000620908 328 ntBASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BPIFA3Q9BQP9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms