Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.51□□□□□ -0.09
VGLL1Q99990 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.51□□□□□ -0.09
VGLL1Q99990 MIR935-201ENST00000401179 91 ntBASIC14.51□□□□□ -0.09
VGLL1Q99990 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.51□□□□□ -0.09
VGLL1Q99990 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.51□□□□□ -0.09
VGLL1Q99990 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.51□□□□□ -0.09
VGLL1Q99990 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.51□□□□□ -0.09
VGLL1Q99990 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.51□□□□□ -0.09
VGLL1Q99990 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
VGLL1Q99990 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 SDHAP1-207ENST00000440850 2000 ntBASIC14.51□□□□□ -0.09
VGLL1Q99990 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.51□□□□□ -0.09
VGLL1Q99990 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VGLL1Q99990 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VGLL1Q99990 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
VGLL1Q99990 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VGLL1Q99990 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.5□□□□□ -0.09
VGLL1Q99990 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.5□□□□□ -0.09
VGLL1Q99990 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
VGLL1Q99990 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.5□□□□□ -0.09
VGLL1Q99990 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.5□□□□□ -0.09
VGLL1Q99990 AC080038.1-201ENST00000611274 1154 ntBASIC14.5□□□□□ -0.09
VGLL1Q99990 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VGLL1Q99990 AL050303.2-201ENST00000619798 666 ntBASIC14.5□□□□□ -0.09
VGLL1Q99990 AC006557.6-201ENST00000623071 864 ntBASIC14.5□□□□□ -0.09
VGLL1Q99990 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
VGLL1Q99990 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 AC009113.1-201ENST00000570267 2443 ntBASIC14.5□□□□□ -0.09
VGLL1Q99990 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.5□□□□□ -0.09
VGLL1Q99990 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
VGLL1Q99990 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
VGLL1Q99990 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
VGLL1Q99990 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 AC073210.2-201ENST00000430369 194 ntBASIC14.49□□□□□ -0.09
VGLL1Q99990 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.49□□□□□ -0.09
VGLL1Q99990 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.49□□□□□ -0.09
VGLL1Q99990 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.49□□□□□ -0.09
VGLL1Q99990 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.49□□□□□ -0.09
VGLL1Q99990 AC073111.5-205ENST00000641717 521 ntBASIC14.49□□□□□ -0.09
VGLL1Q99990 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 AC104417.2-201ENST00000562989 1793 ntBASIC14.49□□□□□ -0.09
VGLL1Q99990 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VGLL1Q99990 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.49□□□□□ -0.09
VGLL1Q99990 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms