Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.54■■□□□ 1.68
ABCA3Q99758 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.54■■□□□ 1.68
ABCA3Q99758 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ABCA3Q99758 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.54■■□□□ 1.68
ABCA3Q99758 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ABCA3Q99758 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ABCA3Q99758 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
ABCA3Q99758 AC009237.14-201ENST00000609975 1594 ntBASIC25.54■■□□□ 1.68
ABCA3Q99758 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.54■■□□□ 1.68
ABCA3Q99758 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC25.54■■□□□ 1.68
ABCA3Q99758 BX640515.1-201ENST00000617215 977 ntBASIC25.54■■□□□ 1.68
ABCA3Q99758 REXO1L6P-202ENST00000619970 1078 ntBASIC25.54■■□□□ 1.68
ABCA3Q99758 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.54■■□□□ 1.68
ABCA3Q99758 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
ABCA3Q99758 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC25.53■■□□□ 1.68
ABCA3Q99758 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 AL023284.2-201ENST00000405850 579 ntBASIC25.53■■□□□ 1.68
ABCA3Q99758 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.53■■□□□ 1.68
ABCA3Q99758 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.53■■□□□ 1.68
ABCA3Q99758 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.53■■□□□ 1.68
ABCA3Q99758 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.53■■□□□ 1.68
ABCA3Q99758 AC099336.1-202ENST00000602961 463 ntBASIC25.53■■□□□ 1.68
ABCA3Q99758 AL390719.2-201ENST00000606993 987 ntBASIC25.53■■□□□ 1.68
ABCA3Q99758 NME4-212ENST00000621774 904 ntTSL 3 BASIC25.53■■□□□ 1.68
ABCA3Q99758 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
ABCA3Q99758 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ABCA3Q99758 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.52■■□□□ 1.68
ABCA3Q99758 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
ABCA3Q99758 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 AL691432.2-201ENST00000607222 2038 ntBASIC25.52■■□□□ 1.68
ABCA3Q99758 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.52■■□□□ 1.68
ABCA3Q99758 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ABCA3Q99758 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.68
ABCA3Q99758 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
ABCA3Q99758 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.68
ABCA3Q99758 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC25.51■■□□□ 1.68
ABCA3Q99758 MCCD1P1-208ENST00000445732 328 ntBASIC25.51■■□□□ 1.68
ABCA3Q99758 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.51■■□□□ 1.68
ABCA3Q99758 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA3Q99758 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC25.51■■□□□ 1.67
ABCA3Q99758 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.51■■□□□ 1.67
ABCA3Q99758 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA3Q99758 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC25.51■■□□□ 1.67
ABCA3Q99758 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
ABCA3Q99758 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.51■■□□□ 1.67
ABCA3Q99758 GPR32P1-201ENST00000601788 811 ntBASIC25.51■■□□□ 1.67
ABCA3Q99758 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC25.51■■□□□ 1.67
ABCA3Q99758 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA3Q99758 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA3Q99758 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ABCA3Q99758 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
ABCA3Q99758 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
ABCA3Q99758 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.5■■□□□ 1.67
ABCA3Q99758 AL353801.3-201ENST00000609898 542 ntBASIC25.5■■□□□ 1.67
ABCA3Q99758 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 IL9RP2-201ENST00000423948 1312 ntBASIC25.5■■□□□ 1.67
ABCA3Q99758 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.5■■□□□ 1.67
ABCA3Q99758 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ABCA3Q99758 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ABCA3Q99758 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ABCA3Q99758 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ABCA3Q99758 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ABCA3Q99758 AC079776.4-201ENST00000511039 504 ntBASIC25.49■■□□□ 1.67
ABCA3Q99758 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC25.49■■□□□ 1.67
ABCA3Q99758 AC091304.2-201ENST00000564639 760 ntBASIC25.49■■□□□ 1.67
ABCA3Q99758 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms