Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL13Q99616 RCC2P6-201ENST00000526625 1557 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCL13Q99616 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 AL596275.1-201ENST00000423464 877 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 AC011506.1-201ENST00000474329 610 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 NUDT16P1-203ENST00000513809 620 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 AC026271.3-201ENST00000571884 352 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCL13Q99616 MIR4497-201ENST00000583208 89 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCL13Q99616 MIR6786-201ENST00000616843 113 ntBASIC16.05■□□□□ 0.16
CCL13Q99616 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL13Q99616 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL13Q99616 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL13Q99616 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL13Q99616 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 AC005332.7-201ENST00000614046 2005 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 AC004951.3-201ENST00000418645 1148 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CCL13Q99616 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.04■□□□□ 0.16
CCL13Q99616 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.04■□□□□ 0.16
CCL13Q99616 AP003071.4-201ENST00000562276 1284 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 MIR4785-201ENST00000585005 73 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.04■□□□□ 0.16
CCL13Q99616 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 AC011298.2-201ENST00000617989 482 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.04■□□□□ 0.16
CCL13Q99616 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL13Q99616 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL13Q99616 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL13Q99616 KRT8P41-201ENST00000533985 1514 ntBASIC16.04■□□□□ 0.16
CCL13Q99616 FSCN1P1-201ENST00000568912 1481 ntBASIC16.03■□□□□ 0.16
CCL13Q99616 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 KRT17P2-201ENST00000300992 1314 ntBASIC16.03■□□□□ 0.16
CCL13Q99616 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CCL13Q99616 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.03■□□□□ 0.16
CCL13Q99616 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 B3GAT3P1-201ENST00000471720 806 ntBASIC16.03■□□□□ 0.16
CCL13Q99616 AC091390.4-202ENST00000476426 537 ntBASIC16.03■□□□□ 0.16
CCL13Q99616 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CCL13Q99616 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL13Q99616 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL13Q99616 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL13Q99616 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL13Q99616 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCL13Q99616 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL13Q99616 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.02■□□□□ 0.16
CCL13Q99616 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCL13Q99616 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.02■□□□□ 0.16
CCL13Q99616 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms