Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
NDNQ99608 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDNQ99608 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.19■□□□□ 0.66
NDNQ99608 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDNQ99608 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.19■□□□□ 0.66
NDNQ99608 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDNQ99608 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDNQ99608 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDNQ99608 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
NDNQ99608 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.18■□□□□ 0.66
NDNQ99608 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NDNQ99608 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.18■□□□□ 0.66
NDNQ99608 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.18■□□□□ 0.66
NDNQ99608 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.18■□□□□ 0.66
NDNQ99608 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.18■□□□□ 0.66
NDNQ99608 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.18■□□□□ 0.66
NDNQ99608 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDNQ99608 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
NDNQ99608 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
NDNQ99608 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.17■□□□□ 0.66
NDNQ99608 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDNQ99608 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NDNQ99608 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDNQ99608 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.16■□□□□ 0.66
NDNQ99608 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NDNQ99608 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.16■□□□□ 0.66
NDNQ99608 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.16■□□□□ 0.66
NDNQ99608 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.16■□□□□ 0.66
NDNQ99608 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.16■□□□□ 0.66
NDNQ99608 PRKY-204ENST00000533551 1019 ntBASIC19.16■□□□□ 0.66
NDNQ99608 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.16■□□□□ 0.66
NDNQ99608 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDNQ99608 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NDNQ99608 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.15■□□□□ 0.66
NDNQ99608 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
NDNQ99608 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDNQ99608 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NDNQ99608 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NDNQ99608 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NDNQ99608 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.15■□□□□ 0.66
NDNQ99608 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDNQ99608 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.15■□□□□ 0.66
NDNQ99608 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDNQ99608 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms