Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC022616.7-201ENST00000525383 220 ntBASIC15.58■□□□□ 0.08
ZNF48Q96MX3 AC139887.4-201ENST00000607877 719 ntBASIC15.58■□□□□ 0.08
ZNF48Q96MX3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.58■□□□□ 0.08
ZNF48Q96MX3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF48Q96MX3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 AC092338.2-201ENST00000568827 1415 ntBASIC15.57■□□□□ 0.08
ZNF48Q96MX3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF48Q96MX3 AFG3L1P-217ENST00000557444 2447 ntBASIC15.57■□□□□ 0.08
ZNF48Q96MX3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 AL023803.3-201ENST00000615559 522 ntBASIC15.56■□□□□ 0.08
ZNF48Q96MX3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 AC009237.14-201ENST00000609975 1594 ntBASIC15.56■□□□□ 0.08
ZNF48Q96MX3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF48Q96MX3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 AC010653.2-201ENST00000623505 997 ntBASIC15.55■□□□□ 0.08
ZNF48Q96MX3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF48Q96MX3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms