Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 AC098934.4-201ENST00000564127 592 ntBASIC17.44■□□□□ 0.38
HPS1Q92902 MIR4651-201ENST00000582622 73 ntBASIC17.44■□□□□ 0.38
HPS1Q92902 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HPS1Q92902 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.44■□□□□ 0.38
HPS1Q92902 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.43■□□□□ 0.38
HPS1Q92902 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HPS1Q92902 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.43■□□□□ 0.38
HPS1Q92902 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 BX276092.2-201ENST00000417668 665 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 POU5F1P3-201ENST00000428824 1078 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.43■□□□□ 0.38
HPS1Q92902 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HPS1Q92902 AC097658.1-201ENST00000475555 843 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.43■□□□□ 0.38
HPS1Q92902 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.43■□□□□ 0.38
HPS1Q92902 RARRES2P4-201ENST00000514074 484 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.43■□□□□ 0.38
HPS1Q92902 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.43■□□□□ 0.38
HPS1Q92902 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.43■□□□□ 0.38
HPS1Q92902 FAM21FP-204ENST00000608637 956 ntBASIC17.43■□□□□ 0.38
HPS1Q92902 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.43■□□□□ 0.38
HPS1Q92902 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HPS1Q92902 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HPS1Q92902 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.43■□□□□ 0.38
HPS1Q92902 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.42■□□□□ 0.38
HPS1Q92902 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.42■□□□□ 0.38
HPS1Q92902 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.42■□□□□ 0.38
HPS1Q92902 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HPS1Q92902 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.42■□□□□ 0.38
HPS1Q92902 RNA5SP413-201ENST00000516373 109 ntBASIC17.42■□□□□ 0.38
HPS1Q92902 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 CROCCP3-202ENST00000420820 1947 ntBASIC17.42■□□□□ 0.38
HPS1Q92902 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HPS1Q92902 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HPS1Q92902 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.42■□□□□ 0.38
HPS1Q92902 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HPS1Q92902 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS1Q92902 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.42■□□□□ 0.38
HPS1Q92902 AC124067.4-201ENST00000519691 2379 ntBASIC17.42■□□□□ 0.38
HPS1Q92902 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HPS1Q92902 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HPS1Q92902 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HPS1Q92902 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
HPS1Q92902 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
HPS1Q92902 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPS1Q92902 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HPS1Q92902 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.41■□□□□ 0.38
HPS1Q92902 ITM2C-210ENST00000620962 501 ntBASIC17.41■□□□□ 0.38
HPS1Q92902 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPS1Q92902 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS1Q92902 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS1Q92902 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPS1Q92902 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS1Q92902 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms