Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.99■■□□□ 1.59
RTF1Q92541 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RTF1Q92541 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RTF1Q92541 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.99■■□□□ 1.59
RTF1Q92541 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.99■■□□□ 1.59
RTF1Q92541 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.99■■□□□ 1.59
RTF1Q92541 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.99■■□□□ 1.59
RTF1Q92541 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.99■■□□□ 1.59
RTF1Q92541 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RTF1Q92541 AL138966.2-201ENST00000621997 464 ntBASIC24.99■■□□□ 1.59
RTF1Q92541 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RTF1Q92541 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.99■■□□□ 1.59
RTF1Q92541 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.99■■□□□ 1.59
RTF1Q92541 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RTF1Q92541 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 KRT18P35-201ENST00000510488 1269 ntBASIC24.98■■□□□ 1.59
RTF1Q92541 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
RTF1Q92541 AL512604.3-201ENST00000569583 964 ntBASIC24.98■■□□□ 1.59
RTF1Q92541 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.98■■□□□ 1.59
RTF1Q92541 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RTF1Q92541 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
RTF1Q92541 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
RTF1Q92541 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RTF1Q92541 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.97■■□□□ 1.59
RTF1Q92541 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RTF1Q92541 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.97■■□□□ 1.59
RTF1Q92541 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.97■■□□□ 1.59
RTF1Q92541 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
RTF1Q92541 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.97■■□□□ 1.59
RTF1Q92541 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.97■■□□□ 1.59
RTF1Q92541 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RTF1Q92541 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.96■■□□□ 1.59
RTF1Q92541 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.96■■□□□ 1.59
RTF1Q92541 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.96■■□□□ 1.59
RTF1Q92541 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.96■■□□□ 1.59
RTF1Q92541 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RTF1Q92541 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
RTF1Q92541 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
RTF1Q92541 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.96■■□□□ 1.59
RTF1Q92541 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.96■■□□□ 1.59
RTF1Q92541 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 Z82202.1-201ENST00000623446 1880 ntBASIC24.96■■□□□ 1.59
RTF1Q92541 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RTF1Q92541 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.95■■□□□ 1.59
RTF1Q92541 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RTF1Q92541 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.95■■□□□ 1.58
RTF1Q92541 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC24.95■■□□□ 1.58
RTF1Q92541 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
RTF1Q92541 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
RTF1Q92541 AK4P3-201ENST00000418260 669 ntBASIC24.95■■□□□ 1.58
RTF1Q92541 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTF1Q92541 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTF1Q92541 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.95■■□□□ 1.58
RTF1Q92541 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms