Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 AC239809.2-201ENST00000415381 517 ntBASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAF3IP1Q8TDR0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TRAF3IP1Q8TDR0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 AL161938.1-201ENST00000569833 2180 ntBASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 AC233263.1-201ENST00000578059 224 ntBASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 AL023875.1-201ENST00000640777 796 ntBASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP1Q8TDR0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP1Q8TDR0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 KRASP1-201ENST00000407852 552 ntBASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 RNF165-205ENST00000588679 2904 ntBASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms