Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SMARCC2Q8TAQ2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 AC073195.1-201ENST00000607241 877 ntBASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 FP475955.4-201ENST00000623131 1990 ntBASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SMARCC2Q8TAQ2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 C1QL1P1-201ENST00000568105 661 ntBASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 AL353708.3-201ENST00000610272 989 ntBASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 AC006333.2-201ENST00000607957 2099 ntBASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SMARCC2Q8TAQ2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 FAM197Y1-201ENST00000421178 764 ntBASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 CD177P1-201ENST00000606252 935 ntBASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 HLA-A-209ENST00000638375 975 ntBASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 IRX1P1-201ENST00000438849 1838 ntBASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMARCC2Q8TAQ2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 KRT17P2-201ENST00000300992 1314 ntBASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 NIFKP9-201ENST00000419265 221 ntBASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 MIR4785-201ENST00000585005 73 ntBASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMARCC2Q8TAQ2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMARCC2Q8TAQ2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms