Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 AC011498.5-201ENST00000592027 486 ntBASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNIP1Q8TAD8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 AC034232.1-201ENST00000506026 1064 ntBASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 IFNL4P1-201ENST00000607083 540 ntBASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNIP1Q8TAD8 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 RASA4DP-201ENST00000460726 1199 ntBASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 AC009078.2-202ENST00000463353 338 ntBASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNIP1Q8TAD8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 AP002383.4-201ENST00000442518 975 ntBASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 BX119927.1-201ENST00000636596 1552 ntBASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNIP1Q8TAD8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.02■□□□□ 0.48
SNIP1Q8TAD8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms