Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC005363.2-201ENST00000618631 242 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 TMPOP1-202ENST00000424642 1267 ntBASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDND2Q8NHS1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 TMEM179-206ENST00000616017 1645 ntBASIC16.27■□□□□ 0.19
CLDND2Q8NHS1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 AC011506.1-201ENST00000474329 610 ntBASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 RN7SL850P-201ENST00000579959 291 ntBASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 AC010947.1-201ENST00000623454 693 ntBASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDND2Q8NHS1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 DGCR10-201ENST00000609839 495 ntBASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 HLA-A-209ENST00000638375 975 ntBASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 AL158211.5-201ENST00000623583 2518 ntBASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms