Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 AC004980.1-204ENST00000429707 299 ntBASIC16.76■□□□□ 0.27
CPEB3Q8NE35 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 AP001412.1-201ENST00000608405 714 ntBASIC16.76■□□□□ 0.27
CPEB3Q8NE35 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 KRT16P1-201ENST00000399124 1418 ntBASIC16.76■□□□□ 0.27
CPEB3Q8NE35 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.76■□□□□ 0.27
CPEB3Q8NE35 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPEB3Q8NE35 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.75■□□□□ 0.27
CPEB3Q8NE35 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 Z85996.1-201ENST00000494644 937 ntBASIC16.75■□□□□ 0.27
CPEB3Q8NE35 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 AC233702.5-201ENST00000584107 538 ntBASIC16.75■□□□□ 0.27
CPEB3Q8NE35 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 AC131212.4-201ENST00000623606 975 ntBASIC16.75■□□□□ 0.27
CPEB3Q8NE35 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.75■□□□□ 0.27
CPEB3Q8NE35 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPEB3Q8NE35 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 FAM197Y1-201ENST00000421178 764 ntBASIC16.74■□□□□ 0.27
CPEB3Q8NE35 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 AC008550.1-201ENST00000511500 884 ntBASIC16.74■□□□□ 0.27
CPEB3Q8NE35 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 KRT8P41-201ENST00000533985 1514 ntBASIC16.74■□□□□ 0.27
CPEB3Q8NE35 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CPEB3Q8NE35 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 AC141586.3-201ENST00000562166 1838 ntBASIC16.73■□□□□ 0.27
CPEB3Q8NE35 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPEB3Q8NE35 AC012618.2-201ENST00000428058 849 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms