Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 AK4P3-201ENST00000418260 669 ntBASIC21.67■■□□□ 1.06
RETREG2Q8NC44 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 AC087289.5-201ENST00000586076 3175 ntBASIC21.67■■□□□ 1.06
RETREG2Q8NC44 RNF165-205ENST00000588679 2904 ntBASIC21.67■■□□□ 1.06
RETREG2Q8NC44 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG2Q8NC44 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG2Q8NC44 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RETREG2Q8NC44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.64■■□□□ 1.06
RETREG2Q8NC44 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RETREG2Q8NC44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RETREG2Q8NC44 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 AC130371.2-201ENST00000619443 611 ntBASIC21.64■■□□□ 1.05
RETREG2Q8NC44 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG2Q8NC44 KRT8P8-201ENST00000434750 1448 ntBASIC21.63■■□□□ 1.05
RETREG2Q8NC44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.63■■□□□ 1.05
RETREG2Q8NC44 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms