Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 SDHAP1-207ENST00000440850 2000 ntBASIC19.86■□□□□ 0.77
CCDC89Q8N998 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.86■□□□□ 0.77
CCDC89Q8N998 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC89Q8N998 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC89Q8N998 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 AC120498.8-201ENST00000614275 531 ntBASIC19.85■□□□□ 0.77
CCDC89Q8N998 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC89Q8N998 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC89Q8N998 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC89Q8N998 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC89Q8N998 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC89Q8N998 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC89Q8N998 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 AC093525.10-201ENST00000625130 1569 ntBASIC19.84■□□□□ 0.77
CCDC89Q8N998 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.84■□□□□ 0.77
CCDC89Q8N998 AL031598.1-201ENST00000561511 1773 ntBASIC19.84■□□□□ 0.77
CCDC89Q8N998 Z98044.1-201ENST00000632503 1764 ntBASIC19.84■□□□□ 0.77
CCDC89Q8N998 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC89Q8N998 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC89Q8N998 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 FP475955.4-201ENST00000623131 1990 ntBASIC19.83■□□□□ 0.77
CCDC89Q8N998 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC89Q8N998 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC89Q8N998 AC098934.4-201ENST00000564127 592 ntBASIC19.83■□□□□ 0.77
CCDC89Q8N998 AL138781.1-201ENST00000566567 1274 ntBASIC19.83■□□□□ 0.77
CCDC89Q8N998 SOX15-203ENST00000570788 1093 ntBASIC19.83■□□□□ 0.77
CCDC89Q8N998 AC083880.1-201ENST00000608266 535 ntBASIC19.83■□□□□ 0.77
CCDC89Q8N998 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC89Q8N998 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC89Q8N998 IRX1P1-201ENST00000438849 1838 ntBASIC19.83■□□□□ 0.76
CCDC89Q8N998 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms