Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 FAM207BP-201ENST00000447172 505 ntBASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AC091390.4-202ENST00000476426 537 ntBASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AP005242.2-201ENST00000580065 1175 ntBASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 ZNF815P-204ENST00000434898 1737 ntBASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 AC098818.2-201ENST00000564925 2320 ntBASIC19.56■□□□□ 0.72
PCDH20Q8N6Y1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 AC008040.2-201ENST00000461049 708 ntBASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 AC018445.3-201ENST00000624177 1945 ntBASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 AC104417.2-201ENST00000562989 1793 ntBASIC19.55■□□□□ 0.72
PCDH20Q8N6Y1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 AC211429.1-201ENST00000415277 523 ntBASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 AC097488.1-201ENST00000507834 756 ntBASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 KRT8P41-201ENST00000533985 1514 ntBASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH20Q8N6Y1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 AL390955.1-201ENST00000428694 934 ntBASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 LINC01023-201ENST00000606054 436 ntBASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 AC133561.5-201ENST00000635547 218 ntBASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH20Q8N6Y1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms